Mon Feb 25 13:44:58 CET 2013 Dummy /home/lmvoortman/CTF_aqcuisition/Feb11/130212_70S/BATCH-tomo/trial6/def4000 Mon Feb 25 14:22:44 CET 2013 track - Only axis: Total points missing = 242 Mon Feb 25 14:23:06 CET 2013 track - Only axis: Total points missing = 217 Mon Feb 25 14:23:23 CET 2013 track - Only axis: Total points missing = 203 Mon Feb 25 14:27:28 CET 2013 track - Only axis: Total points missing = 95 Mon Feb 25 14:27:36 CET 2013 track - Only axis: Total points missing = 85 Mon Feb 25 14:27:43 CET 2013 track - Only axis: Total points missing = 74 Mon Feb 25 14:27:49 CET 2013 track - Only axis: Total points missing = 71 Mon Feb 25 14:27:55 CET 2013 track - Only axis: Total points missing = 71 Mon Feb 25 14:33:09 CET 2013 track - Only axis: Total points missing = 19 Mon Feb 25 14:34:13 CET 2013 track - Only axis: Total points missing = 1 Mon Feb 25 15:10:09 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 4.407 19.133 Mon Feb 25 15:11:18 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 2.216 7.772 Mon Feb 25 15:11:53 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 1.754 1.598 Mon Feb 25 15:12:57 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 1.700 1.466 Mon Feb 25 15:14:18 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 1.654 1.348 Tue Feb 26 13:52:05 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 1.655 1.337 Tue Mar 19 10:28:04 CET 2013 align - Only axis: Ratio of total measured values to all unknowns = 5854/ 395 = 14.82 Residual error mean and sd: 1.655 1.337 Tue Mar 19 15:02:11 CET 2013 Etomo question - Only axis: Dummy: Use Dummy_full.srec04 as the tomogram? Tue Mar 19 15:07:38 CET 2013 3dmod Warning - Only axis: Dummy: 3dmod is not running. Tue Mar 19 15:09:23 CET 2013 3dmod Message - Only axis: Dummy: ERROR: No Zap window has usable rubberband coordinates Tue Mar 19 15:43:48 CET 2013 Comscript Terminated - Only axis: Dummy: Com script failed: flatten.com Log file errors: ERROR: DOPEN - FILE Dummy_flat.xf DOES NOT EXIST ERROR: warpvol -StandardInput: exited with status 1 Standard error output: Python PID: 26418 Tue Mar 19 15:44:17 CET 2013 Entry Error - Only axis: Dummy: Smoothing factor is a required field. Tue Mar 19 15:44:40 CET 2013 flattenwarp - Only axis: Mean Z height is 2.6 139 warping transformations written Tue Mar 19 15:44:52 CET 2013 flattenwarp - Only axis: Mean Z height is 0.9 139 warping transformations written Tue Mar 19 15:47:57 CET 2013 Cannot Open 3dmod - Only axis: Dummy: 3dmod returned: 3 Cannot open 3dmod on the flattened volume